Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm9162-201ENSMUST00000182081 991 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm8197-202ENSMUST00000193422 934 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm16219-201ENSMUST00000120096 274 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm12906-201ENSMUST00000154610 441 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm6114-201ENSMUST00000182472 968 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Mir7051-201ENSMUST00000184167 73 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Gm8181-201ENSMUST00000062242 669 ntBASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldnd1Q9CQX5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Mir181d-201ENSMUST00000102383 72 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm14234-201ENSMUST00000119539 845 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm15197-201ENSMUST00000120526 478 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm37284-201ENSMUST00000193607 539 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm34379-201ENSMUST00000195036 290 ntBASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldnd1Q9CQX5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms