Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa3Q9CQ71 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm15236-201ENSMUST00000117309 379 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm14028-201ENSMUST00000117434 479 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm11663-201ENSMUST00000117888 290 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm12266-201ENSMUST00000120311 962 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm24990-201ENSMUST00000157406 323 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm38117-201ENSMUST00000194653 939 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gm6450-201ENSMUST00000200896 574 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa3Q9CQ71 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm12196-201ENSMUST00000120954 262 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm25881-201ENSMUST00000157783 103 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm17040-202ENSMUST00000170597 889 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm4310-201ENSMUST00000177847 889 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm27341-201ENSMUST00000183570 106 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm29199-201ENSMUST00000187766 775 ntBASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpa3Q9CQ71 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rpa3Q9CQ71 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Rpa3Q9CQ71 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rpa3Q9CQ71 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rpa3Q9CQ71 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms