Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim8Q99PJ2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim8Q99PJ2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm25214-201ENSMUST00000104573 129 ntBASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm14441-201ENSMUST00000121960 540 ntBASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.52□□□□□ -0.57
Trim8Q99PJ2 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim8Q99PJ2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm11531-201ENSMUST00000117614 555 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm38002-201ENSMUST00000193255 180 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim8Q99PJ2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim8Q99PJ2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms