Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm14270-201ENSMUST00000118388 846 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm15615-201ENSMUST00000118876 198 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm37826-201ENSMUST00000195329 322 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm18561-201ENSMUST00000206027 804 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm16380-201ENSMUST00000077997 478 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm23105-201ENSMUST00000083719 134 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Gm5870-201ENSMUST00000196461 282 ntBASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx6-1Q99MA9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm15003-201ENSMUST00000118884 446 ntBASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkx6-1Q99MA9 Gm22379-201ENSMUST00000157480 131 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms