Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm23699-201ENSMUST00000158835 135 ntBASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.32□□□□□ -0.6
Rab28Q99KL7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.32□□□□□ -0.6
Rab28Q99KL7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.31□□□□□ -0.6
Rab28Q99KL7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Gm3150-201ENSMUST00000166418 204 ntBASIC11.31□□□□□ -0.6
Rab28Q99KL7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Nsd1-205ENSMUST00000224693 852 ntBASIC11.31□□□□□ -0.6
Rab28Q99KL7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rab28Q99KL7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.3□□□□□ -0.6
Rab28Q99KL7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab28Q99KL7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms