Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Gm15808-201ENSMUST00000119046 604 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Rprl1-201ENSMUST00000158050 327 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Gm26361-201ENSMUST00000158868 186 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Gm25700-201ENSMUST00000177693 110 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Gm18711-201ENSMUST00000199341 750 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.38□□□□□ -0.43
Usp11Q99K46 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp11Q99K46 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp11Q99K46 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm13296-201ENSMUST00000117854 997 ntBASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp11Q99K46 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Usp11Q99K46 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.37□□□□□ -0.43
Usp11Q99K46 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp11Q99K46 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp11Q99K46 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.36□□□□□ -0.43
Usp11Q99K46 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm11989-201ENSMUST00000117240 672 ntBASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm14130-201ENSMUST00000118417 987 ntBASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm11362-201ENSMUST00000118838 850 ntBASIC12.36□□□□□ -0.43
Usp11Q99K46 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.36□□□□□ -0.43
Usp11Q99K46 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp11Q99K46 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp11Q99K46 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms