Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm17420-201ENSMUST00000164753 153 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm27046-201ENSMUST00000182160 463 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Lect2-202ENSMUST00000225183 823 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm5455-201ENSMUST00000058710 715 ntBASIC12.11□□□□□ -0.47
Trim60Q8VI40 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim60Q8VI40 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trim60Q8VI40 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm23270-201ENSMUST00000104055 131 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm13392-201ENSMUST00000117708 150 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm12241-201ENSMUST00000118330 726 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm14109-201ENSMUST00000118814 309 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm15004-201ENSMUST00000119192 630 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Mir6420-201ENSMUST00000185032 102 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm18054-201ENSMUST00000207539 555 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.1□□□□□ -0.47
Trim60Q8VI40 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim60Q8VI40 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim60Q8VI40 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gm27572-201ENSMUST00000183702 255 ntBASIC12.09□□□□□ -0.47
Trim60Q8VI40 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.09□□□□□ -0.47
Trim60Q8VI40 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gm43962-201ENSMUST00000203898 190 ntBASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.09□□□□□ -0.47
Trim60Q8VI40 Gm45331-201ENSMUST00000209868 554 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms