Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rprd1aQ8VDS4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm11941-201ENSMUST00000119904 610 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm13461-201ENSMUST00000120980 662 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm8199-201ENSMUST00000121323 823 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm8815-201ENSMUST00000173809 620 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm9192-201ENSMUST00000183221 985 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm18753-201ENSMUST00000201000 566 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rprd1aQ8VDS4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Gm37246-201ENSMUST00000192665 835 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Gm43378-201ENSMUST00000199336 582 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Spcs1-203ENSMUST00000226374 592 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rprd1aQ8VDS4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms