Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm9062-201ENSMUST00000117712 727 ntBASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm28686-201ENSMUST00000187404 609 ntBASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm26448-201ENSMUST00000082446 203 ntBASIC10.91□□□□□ -0.66
Rfc3Q8R323 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.91□□□□□ -0.66
Rfc3Q8R323 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfc3Q8R323 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm13035-201ENSMUST00000117496 342 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm12164-201ENSMUST00000121695 551 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm10051-201ENSMUST00000145209 414 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm5523-201ENSMUST00000180415 997 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm43184-201ENSMUST00000197247 542 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm1821-202ENSMUST00000227415 750 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm21811-201ENSMUST00000096485 930 ntBASIC10.9□□□□□ -0.66
Rfc3Q8R323 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfc3Q8R323 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfc3Q8R323 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfc3Q8R323 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rfc3Q8R323 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.89□□□□□ -0.67
Rfc3Q8R323 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfc3Q8R323 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms