Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp7Q8R1T1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm13117-201ENSMUST00000120894 691 ntBASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm27390-201ENSMUST00000184516 176 ntBASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp7Q8R1T1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm11960-201ENSMUST00000122068 925 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm42816-201ENSMUST00000198433 325 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp7Q8R1T1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp7Q8R1T1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.95□□□□□ -0.02
Chmp7Q8R1T1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms