Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 RN7SKP109-201ENST00000410592 316 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 MIR4472-1-201ENST00000584349 80 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC090386.2-201ENST00000623010 1039 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC073592.2-201ENST00000623062 780 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AL451007.2-201ENST00000632004 563 ntBASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KLHDC9Q8NEP7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
KLHDC9Q8NEP7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 OR5BD1P-201ENST00000532527 817 ntBASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 RN7SL357P-201ENST00000581065 298 ntBASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.08■□□□□ 0.16
KLHDC9Q8NEP7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 AQP7P5-201ENST00000428759 1049 ntBASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 AQP7P4-201ENST00000447083 1042 ntBASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 AQP7P2-201ENST00000453967 1041 ntBASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.07■□□□□ 0.16
KLHDC9Q8NEP7 RN7SL596P-201ENST00000582123 288 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms