Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm9369-201ENSMUST00000196009 733 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm18010-201ENSMUST00000203553 202 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 AC159810.1-201ENSMUST00000214838 1480 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm23595-201ENSMUST00000104306 130 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm13171-201ENSMUST00000117233 391 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm12418-201ENSMUST00000118116 942 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm12986-201ENSMUST00000119037 967 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 AC187103.3-201ENSMUST00000225725 646 ntBASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx54Q8K4L0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Gm44913-201ENSMUST00000208060 2990 ntBASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 CT025603.1-201ENSMUST00000224040 448 ntBASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx54Q8K4L0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ddx54Q8K4L0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms