Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.02□□□□□ -0.49
CopaQ8CIE6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CopaQ8CIE6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm22133-201ENSMUST00000102082 109 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm15515-201ENSMUST00000117827 822 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm23699-201ENSMUST00000158835 135 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.01□□□□□ -0.49
CopaQ8CIE6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CopaQ8CIE6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CopaQ8CIE6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 Gm6335-201ENSMUST00000118081 1194 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm7816-201ENSMUST00000119884 1194 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm11450-201ENSMUST00000121144 333 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm15542-201ENSMUST00000121585 1194 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 n-R5s14-201ENSMUST00000122688 107 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm22334-201ENSMUST00000158070 133 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 Gm5525-201ENSMUST00000190438 1312 ntBASIC12□□□□□ -0.49
CopaQ8CIE6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12□□□□□ -0.49
CopaQ8CIE6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopaQ8CIE6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms