Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Morn2-202ENSMUST00000227729 656 ntBASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc28aQ8CEI3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Ccdc28aQ8CEI3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28aQ8CEI3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28aQ8CEI3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28aQ8CEI3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc28aQ8CEI3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm6013-201ENSMUST00000212264 699 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28aQ8CEI3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28aQ8CEI3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms