Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm4294-201ENSMUST00000105169 614 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm43947-201ENSMUST00000203019 959 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm17825-201ENSMUST00000206836 794 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx1Q8C8B0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm44008-201ENSMUST00000204345 412 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm8342-201ENSMUST00000209839 757 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx1Q8C8B0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Alx1Q8C8B0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms