Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm2383-201ENSMUST00000181461 807 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim9Q8C7M3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim9Q8C7M3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trim9Q8C7M3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm15515-201ENSMUST00000117827 822 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim9Q8C7M3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim9Q8C7M3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms