Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ska3Q8C263 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska3Q8C263 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska3Q8C263 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska3Q8C263 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska3Q8C263 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ska3Q8C263 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm12857-201ENSMUST00000117678 592 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm7857-201ENSMUST00000117957 358 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm12196-201ENSMUST00000120954 262 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ska3Q8C263 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.06□□□□□ -0.64
Ska3Q8C263 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ska3Q8C263 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ska3Q8C263 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Gm14724-201ENSMUST00000118400 537 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.05□□□□□ -0.64
Ska3Q8C263 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.05□□□□□ -0.64
Ska3Q8C263 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska3Q8C263 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms