Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm37981-201ENSMUST00000194280 535 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm8574-201ENSMUST00000203207 924 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Olfr584-201ENSMUST00000098210 964 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh3rf2Q8BZT2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm9358-201ENSMUST00000183067 927 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm44329-201ENSMUST00000197469 112 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm7600-201ENSMUST00000209657 785 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm2875-201ENSMUST00000211333 360 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gm10752-201ENSMUST00000218348 729 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh3rf2Q8BZT2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm9089-201ENSMUST00000122027 526 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm37458-201ENSMUST00000194055 410 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm34023-201ENSMUST00000195539 217 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm8342-201ENSMUST00000209839 757 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.88□□□□□ -0.51
Sh3rf2Q8BZT2 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms