Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Gm14942-201ENSMUST00000119642 336 ntBASIC16.49■□□□□ 0.23
Usp47Q8BY87 Gm12899-201ENSMUST00000120565 551 ntBASIC16.49■□□□□ 0.23
Usp47Q8BY87 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Gm7741-201ENSMUST00000181445 989 ntBASIC16.49■□□□□ 0.23
Usp47Q8BY87 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Usp47Q8BY87 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.49■□□□□ 0.23
Usp47Q8BY87 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Usp47Q8BY87 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm15329-201ENSMUST00000121408 155 ntBASIC16.48■□□□□ 0.23
Usp47Q8BY87 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm25492-201ENSMUST00000157383 129 ntBASIC16.48■□□□□ 0.23
Usp47Q8BY87 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC16.48■□□□□ 0.23
Usp47Q8BY87 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Usp47Q8BY87 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC16.48■□□□□ 0.23
Usp47Q8BY87 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm25148-201ENSMUST00000104611 123 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm13888-201ENSMUST00000119148 422 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm21778-201ENSMUST00000178779 471 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.47■□□□□ 0.23
Usp47Q8BY87 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Usp47Q8BY87 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.46■□□□□ 0.23
Usp47Q8BY87 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC16.46■□□□□ 0.23
Usp47Q8BY87 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms