Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm44405-201ENSMUST00000198952 126 ntBASIC9.64□□□□□ -0.87
Smco3Q8BQM7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm45668-201ENSMUST00000211271 493 ntBASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm5781-201ENSMUST00000219792 443 ntBASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smco3Q8BQM7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gm23912-201ENSMUST00000104687 87 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gm12502-201ENSMUST00000120197 444 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Gm10076-201ENSMUST00000073238 384 ntBASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Smco3Q8BQM7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms