Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm3836-201ENSMUST00000211377 1613 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm44913-201ENSMUST00000208060 2990 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm15519-201ENSMUST00000120088 1566 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Gm9372-201ENSMUST00000168454 430 ntBASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Gm7069-201ENSMUST00000182418 1008 ntBASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Gm43966-201ENSMUST00000203301 612 ntBASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col16a1Q8BLX7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm15982-201ENSMUST00000121681 554 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm23647-201ENSMUST00000175042 109 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Rn5s-201ENSMUST00000177555 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s108-201ENSMUST00000177575 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s121-201ENSMUST00000177589 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s146-201ENSMUST00000177889 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm22109-201ENSMUST00000177995 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm22291-201ENSMUST00000178027 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s141-201ENSMUST00000178066 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm23284-201ENSMUST00000178069 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s100-201ENSMUST00000178106 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s111-201ENSMUST00000178203 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s105-201ENSMUST00000178499 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s149-201ENSMUST00000178520 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s103-201ENSMUST00000178755 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s123-201ENSMUST00000178804 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s142-201ENSMUST00000178820 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s144-201ENSMUST00000178859 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s139-201ENSMUST00000178975 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s134-201ENSMUST00000178983 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s136-201ENSMUST00000179080 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm25018-201ENSMUST00000179081 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s104-201ENSMUST00000179107 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s113-201ENSMUST00000179143 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s133-201ENSMUST00000179275 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s117-201ENSMUST00000179431 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm25212-201ENSMUST00000179432 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s138-201ENSMUST00000179476 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s122-201ENSMUST00000179500 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s143-201ENSMUST00000179542 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s107-201ENSMUST00000179704 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm26391-201ENSMUST00000179843 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s110-201ENSMUST00000179995 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s128-201ENSMUST00000180096 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 n-R5s124-201ENSMUST00000180334 119 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm19013-201ENSMUST00000183895 1222 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Mrip-ps-201ENSMUST00000184613 940 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm19014-201ENSMUST00000184828 1189 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm5178-201ENSMUST00000219380 898 ntBASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col16a1Q8BLX7 Gm24089-201ENSMUST00000093696 109 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms