Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm13297-201ENSMUST00000120205 934 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 BC043934-202ENSMUST00000185694 2356 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cdhr3Q8BL00 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Cdhr3Q8BL00 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms