Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Samm50Q8BGH2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm24990-201ENSMUST00000157406 323 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm17812-201ENSMUST00000204935 318 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm8913-201ENSMUST00000209491 641 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Samm50Q8BGH2 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm23912-201ENSMUST00000104687 87 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm37466-201ENSMUST00000195692 652 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm45433-201ENSMUST00000209386 247 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm19994-201ENSMUST00000217086 586 ntBASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Samm50Q8BGH2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Gm11439-201ENSMUST00000118598 409 ntBASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Samm50Q8BGH2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms