Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm28833-201ENSMUST00000189671 559 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm5982-201ENSMUST00000196234 512 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm25053-201ENSMUST00000103982 133 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm25922-201ENSMUST00000104281 130 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm14395-201ENSMUST00000120494 563 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm24679-201ENSMUST00000158762 111 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Mir8093-201ENSMUST00000185043 137 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm25053-202ENSMUST00000199731 132 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm43671-201ENSMUST00000200422 433 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm39288-201ENSMUST00000210554 446 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Snrnp40Q6PE01 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Snrnp40Q6PE01 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms