Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 AC137871.1-201ENSMUST00000228278 475 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm18123-201ENSMUST00000210874 822 ntBASIC13.57□□□□□ -0.24
Scn9aQ62205 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.57□□□□□ -0.24
Scn9aQ62205 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn9aQ62205 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn9aQ62205 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm14052-201ENSMUST00000121434 1031 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn9aQ62205 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm20781-201ENSMUST00000193154 693 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm21736-201ENSMUST00000195399 693 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Scn9aQ62205 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.56□□□□□ -0.24
Scn9aQ62205 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm11993-201ENSMUST00000121861 820 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn9aQ62205 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn9aQ62205 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.56□□□□□ -0.24
Scn9aQ62205 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn9aQ62205 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Scn9aQ62205 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn9aQ62205 Gm12912-201ENSMUST00000121596 1381 ntBASIC13.55□□□□□ -0.24
Scn9aQ62205 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms