Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm5419-201ENSMUST00000119301 527 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox17Q61473 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox17Q61473 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox17Q61473 Gm38314-201ENSMUST00000195709 625 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.96□□□□□ -0.65
Sox17Q61473 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox17Q61473 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox17Q61473 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sox17Q61473 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.96□□□□□ -0.66
Sox17Q61473 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox17Q61473 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox17Q61473 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox17Q61473 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox17Q61473 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Sox17Q61473 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm4986-201ENSMUST00000119731 549 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 Gm14832-201ENSMUST00000121289 322 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox17Q61473 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Auts2-212ENSMUST00000178555 309 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm18893-201ENSMUST00000198416 943 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox17Q61473 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Sox17Q61473 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sox17Q61473 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm9996-201ENSMUST00000070359 913 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.95□□□□□ -0.66
Sox17Q61473 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Sox17Q61473 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox17Q61473 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox17Q61473 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox17Q61473 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms