Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.06□□□□□ -0.16
Vps54Q5SPW0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vps54Q5SPW0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Mir8115-201ENSMUST00000184992 119 ntBASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps54Q5SPW0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gm5523-201ENSMUST00000180415 997 ntBASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps54Q5SPW0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm16166-201ENSMUST00000118291 787 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm15352-201ENSMUST00000118696 270 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm11836-201ENSMUST00000121022 441 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm7150-201ENSMUST00000122032 981 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Gm20495-201ENSMUST00000173902 235 ntBASIC14.03□□□□□ -0.16
Vps54Q5SPW0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps54Q5SPW0 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms