Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm11660-201ENSMUST00000120955 412 ntBASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5d-4Q5R1F6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm11960-201ENSMUST00000122068 925 ntBASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm27627-201ENSMUST00000183644 150 ntBASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm44262-201ENSMUST00000204969 372 ntBASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm17827-201ENSMUST00000211825 742 ntBASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gm5705-201ENSMUST00000066241 711 ntBASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5d-4Q5R1F6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5d-4Q5R1F6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms