Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm16215-201ENSMUST00000161990 637 ntBASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm15823-201ENSMUST00000064305 670 ntBASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Gm5847-201ENSMUST00000178959 1595 ntBASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Gm37917-201ENSMUST00000194711 392 ntBASIC8.79□□□□□ -1
Trav3-3Q5R1C3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav3-3Q5R1C3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 AC117656.2-201ENSMUST00000224931 2215 ntBASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav3-3Q5R1C3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms