Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm18733-202ENSMUST00000174447 401 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Gm6794-201ENSMUST00000203829 457 ntBASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Snord23-201ENSMUST00000116828 109 ntBASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.27□□□□□ -0.6
Vps13aQ5H8C4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Gm19918-201ENSMUST00000194858 400 ntBASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps13aQ5H8C4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Vps13aQ5H8C4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms