Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm9022-201ENSMUST00000182482 992 ntBASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cks1brtQ3UNC9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Gm3836-201ENSMUST00000211377 1613 ntBASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 H2af-ps-201ENSMUST00000119066 295 ntBASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Gm6007-201ENSMUST00000208170 823 ntBASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Gm15500-202ENSMUST00000071641 1019 ntBASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cks1brtQ3UNC9 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cks1brtQ3UNC9 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms