Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm7783-201ENSMUST00000204795 781 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43aQ3TL54 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Gm10608-202ENSMUST00000213924 676 ntBASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim43aQ3TL54 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms