Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.6□□□□□ -0.87
Trim63Q38HM4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.6□□□□□ -0.87
Trim63Q38HM4 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Mir5126-201ENSMUST00000175513 77 ntBASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gm10766-202ENSMUST00000194123 606 ntBASIC9.59□□□□□ -0.87
Trim63Q38HM4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trim63Q38HM4 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.58□□□□□ -0.88
Trim63Q38HM4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.58□□□□□ -0.88
Trim63Q38HM4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms