Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rab42Q0PD08 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Rab42Q0PD08 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rab42Q0PD08 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm43433-201ENSMUST00000196573 481 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm5781-201ENSMUST00000219792 443 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.41□□□□□ -0.74
Rab42Q0PD08 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rab42Q0PD08 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm11964-201ENSMUST00000120982 444 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm7809-201ENSMUST00000153199 742 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm25261-201ENSMUST00000157416 134 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm8738-201ENSMUST00000172606 329 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.4□□□□□ -0.74
Rab42Q0PD08 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Rab42Q0PD08 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms