Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm17812-201ENSMUST00000204935 318 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.11□□□□□ -0.95
Cdx4Q07424 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cdx4Q07424 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cdx4Q07424 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm7857-201ENSMUST00000117957 358 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm13996-201ENSMUST00000118456 430 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm4909-201ENSMUST00000118749 794 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm42937-201ENSMUST00000197360 752 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm43378-201ENSMUST00000199336 582 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.1□□□□□ -0.95
Cdx4Q07424 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Cdx4Q07424 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cdx4Q07424 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cdx4Q07424 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Cdx4Q07424 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.09□□□□□ -0.95
Cdx4Q07424 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx4Q07424 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx4Q07424 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx4Q07424 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cdx4Q07424 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cdx4Q07424 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms