Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm26361-201ENSMUST00000158868 186 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm27627-201ENSMUST00000183644 150 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm9136-201ENSMUST00000193368 454 ntBASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn6Q03958 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 AA914427-201ENSMUST00000193194 1166 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Olfr582-201ENSMUST00000098212 960 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn6Q03958 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.79□□□□□ -0.52
Pfdn6Q03958 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn6Q03958 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.79□□□□□ -0.52
Pfdn6Q03958 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms