Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Gm6867-201ENSMUST00000219165 425 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VcpQ01853 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VcpQ01853 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VcpQ01853 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Gm11801-201ENSMUST00000117807 746 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.56□□□□□ -0.4
VcpQ01853 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.56□□□□□ -0.4
VcpQ01853 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.56□□□□□ -0.4
VcpQ01853 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VcpQ01853 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VcpQ01853 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VcpQ01853 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.56□□□□□ -0.4
VcpQ01853 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.56□□□□□ -0.4
VcpQ01853 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VcpQ01853 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VcpQ01853 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcpQ01853 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VcpQ01853 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.55□□□□□ -0.4
VcpQ01853 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VcpQ01853 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.55□□□□□ -0.4
VcpQ01853 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.55□□□□□ -0.4
VcpQ01853 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.55□□□□□ -0.4
VcpQ01853 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.55□□□□□ -0.4
VcpQ01853 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Mir7686-201ENSMUST00000200604 57 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.55□□□□□ -0.4
VcpQ01853 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.55□□□□□ -0.4
VcpQ01853 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VcpQ01853 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Snora73b-201ENSMUST00000083419 205 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Gm8325-201ENSMUST00000099086 453 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VcpQ01853 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.55□□□□□ -0.4
VcpQ01853 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.55□□□□□ -0.4
VcpQ01853 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcpQ01853 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms