Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.56□□□□□ -0.56
Shox2P70390 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Mir6392-201ENSMUST00000184924 108 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Gm18893-201ENSMUST00000198416 943 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.56□□□□□ -0.56
Shox2P70390 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Shox2P70390 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.56□□□□□ -0.56
Shox2P70390 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shox2P70390 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Shox2P70390 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shox2P70390 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.55□□□□□ -0.56
Shox2P70390 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Gm14999-201ENSMUST00000121039 624 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.55□□□□□ -0.56
Shox2P70390 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.55□□□□□ -0.56
Shox2P70390 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Gm4271-201ENSMUST00000174444 973 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shox2P70390 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Gm37917-201ENSMUST00000194711 392 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.55□□□□□ -0.56
Shox2P70390 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shox2P70390 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.55□□□□□ -0.56
Shox2P70390 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.55□□□□□ -0.56
Shox2P70390 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.55□□□□□ -0.56
Shox2P70390 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shox2P70390 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shox2P70390 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.54□□□□□ -0.56
Shox2P70390 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.54□□□□□ -0.56
Shox2P70390 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.54□□□□□ -0.56
Shox2P70390 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.54□□□□□ -0.56
Shox2P70390 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm4984-201ENSMUST00000115987 360 ntBASIC11.54□□□□□ -0.56
Shox2P70390 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.54□□□□□ -0.56
Shox2P70390 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm13570-201ENSMUST00000140763 309 ntBASIC11.54□□□□□ -0.56
Shox2P70390 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shox2P70390 Gm44872-201ENSMUST00000207864 420 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms