Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.05□□□□□ -0.48
Msx3P70354 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Mir7677-201ENSMUST00000184226 67 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm18038-201ENSMUST00000197900 485 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Gm270-201ENSMUST00000223010 976 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Msx3P70354 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Msx3P70354 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.05□□□□□ -0.48
Msx3P70354 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.05□□□□□ -0.48
Msx3P70354 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msx3P70354 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx3P70354 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx3P70354 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Msx3P70354 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.04□□□□□ -0.48
Msx3P70354 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Msx3P70354 Gm13350-201ENSMUST00000120519 479 ntBASIC12.04□□□□□ -0.48
Msx3P70354 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.04□□□□□ -0.48
Msx3P70354 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm4310-201ENSMUST00000177847 889 ntBASIC12.04□□□□□ -0.48
Msx3P70354 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Mir8093-201ENSMUST00000185043 137 ntBASIC12.04□□□□□ -0.48
Msx3P70354 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Msx3P70354 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm9797-202ENSMUST00000218003 294 ntBASIC12.04□□□□□ -0.48
Msx3P70354 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx3P70354 Gm26448-201ENSMUST00000082446 203 ntBASIC12.04□□□□□ -0.48
Msx3P70354 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Msx3P70354 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Msx3P70354 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Msx3P70354 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.04□□□□□ -0.48
Msx3P70354 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Msx3P70354 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.04□□□□□ -0.48
Msx3P70354 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx3P70354 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx3P70354 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Msx3P70354 Gm11509-201ENSMUST00000117358 325 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Gm11500-201ENSMUST00000118237 601 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Gm14130-201ENSMUST00000118417 987 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.03□□□□□ -0.48
Msx3P70354 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Gm17376-201ENSMUST00000166016 84 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Gm7584-201ENSMUST00000175829 940 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms