Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.62□□□□□ -0.55
Crnkl1P63154 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.62□□□□□ -0.55
Crnkl1P63154 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Crnkl1P63154 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.62□□□□□ -0.55
Crnkl1P63154 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Crnkl1P63154 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Crnkl1P63154 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm5187-201ENSMUST00000117317 991 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm12363-201ENSMUST00000122250 668 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.61□□□□□ -0.55
Crnkl1P63154 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm9022-201ENSMUST00000182482 992 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm27572-201ENSMUST00000183702 255 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.61□□□□□ -0.55
Crnkl1P63154 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm9899-201ENSMUST00000065519 555 ntBASIC11.61□□□□□ -0.55
Crnkl1P63154 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Crnkl1P63154 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Crnkl1P63154 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm22121-201ENSMUST00000175148 54 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm45880-201ENSMUST00000213041 853 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Snora73a-201ENSMUST00000082453 205 ntBASIC11.6□□□□□ -0.55
Crnkl1P63154 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.6□□□□□ -0.55
Crnkl1P63154 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Crnkl1P63154 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms