Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.32□□□□□ -0.76
Lsm6P62313 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.32□□□□□ -0.76
Lsm6P62313 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lsm6P62313 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lsm6P62313 Mir7677-201ENSMUST00000184226 67 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 Gm43002-201ENSMUST00000200310 155 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 Rps4l-202ENSMUST00000204242 789 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 Gm45433-201ENSMUST00000209386 247 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Gm270-201ENSMUST00000223010 976 ntBASIC10.32□□□□□ -0.76
Lsm6P62313 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lsm6P62313 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Lsm6P62313 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.31□□□□□ -0.76
Lsm6P62313 Gm28071-201ENSMUST00000190355 478 ntBASIC10.31□□□□□ -0.76
Lsm6P62313 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.31□□□□□ -0.76
Lsm6P62313 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Lsm6P62313 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Gm26448-201ENSMUST00000082446 203 ntBASIC10.31□□□□□ -0.76
Lsm6P62313 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.31□□□□□ -0.76
Lsm6P62313 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Lsm6P62313 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm6P62313 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm6P62313 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Lsm6P62313 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.3□□□□□ -0.76
Lsm6P62313 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.3□□□□□ -0.76
Lsm6P62313 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.3□□□□□ -0.76
Lsm6P62313 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm6P62313 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms