Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61a1P61620 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Gm9022-201ENSMUST00000182482 992 ntBASIC10.36□□□□□ -0.75
Sec61a1P61620 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.36□□□□□ -0.75
Sec61a1P61620 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a1P61620 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a1P61620 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a1P61620 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm25668-201ENSMUST00000157700 129 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Sec61a1P61620 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm39404-201ENSMUST00000216350 313 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a1P61620 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.35□□□□□ -0.75
Sec61a1P61620 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a1P61620 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.34□□□□□ -0.75
Sec61a1P61620 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms