Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Sf3b6P59708 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm23931-201ENSMUST00000103842 109 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm7809-201ENSMUST00000153199 742 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm6222-202ENSMUST00000182143 629 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm3890-201ENSMUST00000182416 207 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm38002-201ENSMUST00000193255 180 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm19309-201ENSMUST00000218295 205 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.43□□□□□ -0.74
Sf3b6P59708 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.43□□□□□ -0.74
Sf3b6P59708 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sf3b6P59708 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Erich3-203ENSMUST00000189969 3460 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.42□□□□□ -0.74
Sf3b6P59708 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm37201-201ENSMUST00000191845 523 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm18363-201ENSMUST00000221671 730 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms