Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.33□□□□□ -0.44
NcanP55066 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.33□□□□□ -0.44
NcanP55066 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NcanP55066 Gm15528-201ENSMUST00000117821 864 ntBASIC12.33□□□□□ -0.44
NcanP55066 Gm15374-201ENSMUST00000119313 844 ntBASIC12.33□□□□□ -0.44
NcanP55066 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.33□□□□□ -0.44
NcanP55066 Gm20495-201ENSMUST00000173902 235 ntBASIC12.33□□□□□ -0.44
NcanP55066 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.33□□□□□ -0.44
NcanP55066 Gm29543-201ENSMUST00000188138 967 ntBASIC12.33□□□□□ -0.44
NcanP55066 Gm29651-201ENSMUST00000189088 697 ntBASIC12.33□□□□□ -0.44
NcanP55066 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.33□□□□□ -0.44
NcanP55066 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NcanP55066 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Rubie-203ENSMUST00000227803 2430 ntBASIC12.33□□□□□ -0.44
NcanP55066 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NcanP55066 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NcanP55066 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.33□□□□□ -0.44
NcanP55066 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NcanP55066 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NcanP55066 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Gm8111-201ENSMUST00000117659 987 ntBASIC12.32□□□□□ -0.44
NcanP55066 Gm11475-201ENSMUST00000118482 476 ntBASIC12.32□□□□□ -0.44
NcanP55066 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.32□□□□□ -0.44
NcanP55066 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.32□□□□□ -0.44
NcanP55066 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.32□□□□□ -0.44
NcanP55066 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.32□□□□□ -0.44
NcanP55066 Gm22763-201ENSMUST00000158374 107 ntBASIC12.32□□□□□ -0.44
NcanP55066 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.32□□□□□ -0.44
NcanP55066 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.32□□□□□ -0.44
NcanP55066 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NcanP55066 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NcanP55066 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NcanP55066 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NcanP55066 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.31□□□□□ -0.44
NcanP55066 Gm16219-201ENSMUST00000120096 274 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms