Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.51□□□□□ -0.41
NrlP54846 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NrlP54846 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.5□□□□□ -0.41
NrlP54846 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NrlP54846 Gm25076-201ENSMUST00000104098 132 ntBASIC12.5□□□□□ -0.41
NrlP54846 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Gm14942-201ENSMUST00000119642 336 ntBASIC12.5□□□□□ -0.41
NrlP54846 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.5□□□□□ -0.41
NrlP54846 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.5□□□□□ -0.41
NrlP54846 Gm3150-201ENSMUST00000166418 204 ntBASIC12.5□□□□□ -0.41
NrlP54846 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NrlP54846 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.5□□□□□ -0.41
NrlP54846 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Gm37458-201ENSMUST00000194055 410 ntBASIC12.5□□□□□ -0.41
NrlP54846 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
NrlP54846 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Gm44487-201ENSMUST00000205145 325 ntBASIC12.5□□□□□ -0.41
NrlP54846 Gm6108-201ENSMUST00000208365 367 ntBASIC12.5□□□□□ -0.41
NrlP54846 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.5□□□□□ -0.41
NrlP54846 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.5□□□□□ -0.41
NrlP54846 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.5□□□□□ -0.41
NrlP54846 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.5□□□□□ -0.41
NrlP54846 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
NrlP54846 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NrlP54846 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NrlP54846 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.49□□□□□ -0.41
NrlP54846 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NrlP54846 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.49□□□□□ -0.41
NrlP54846 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
NrlP54846 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NrlP54846 Gm25880-201ENSMUST00000104331 132 ntBASIC12.49□□□□□ -0.41
NrlP54846 Gm13937-201ENSMUST00000121000 988 ntBASIC12.49□□□□□ -0.41
NrlP54846 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.49□□□□□ -0.41
NrlP54846 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.49□□□□□ -0.41
NrlP54846 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.49□□□□□ -0.41
NrlP54846 Gm6407-201ENSMUST00000176468 549 ntBASIC12.49□□□□□ -0.41
NrlP54846 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.49□□□□□ -0.41
NrlP54846 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NrlP54846 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Gm19091-201ENSMUST00000208120 978 ntBASIC12.49□□□□□ -0.41
NrlP54846 Gm17931-201ENSMUST00000208132 634 ntBASIC12.49□□□□□ -0.41
NrlP54846 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NrlP54846 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NrlP54846 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NrlP54846 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.49□□□□□ -0.41
NrlP54846 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NrlP54846 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NrlP54846 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NrlP54846 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NrlP54846 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NrlP54846 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms