Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm9797-202ENSMUST00000218003 294 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.7□□□□□ -0.54
Atxn1P54254 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Atxn1P54254 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.69□□□□□ -0.54
Atxn1P54254 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.69□□□□□ -0.54
Atxn1P54254 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm14193-201ENSMUST00000105067 153 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm16166-201ENSMUST00000118291 787 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Atxn1P54254 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Atxn1P54254 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Atxn1P54254 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.69□□□□□ -0.54
Atxn1P54254 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Atxn1P54254 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Mir181d-201ENSMUST00000102383 72 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.68□□□□□ -0.54
Atxn1P54254 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Gm15703-201ENSMUST00000120250 880 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.68□□□□□ -0.54
Atxn1P54254 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms