Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pdx1P52946 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pdx1P52946 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm4909-201ENSMUST00000118749 794 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Gm8199-201ENSMUST00000121323 823 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm18734-201ENSMUST00000172937 808 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm2965-201ENSMUST00000198365 343 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm6867-201ENSMUST00000219165 425 ntBASIC11.59□□□□□ -0.55
Pdx1P52946 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pdx1P52946 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdx1P52946 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Pdx1P52946 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Pdx1P52946 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Pdx1P52946 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Gm14058-201ENSMUST00000116082 735 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Gm13035-201ENSMUST00000117496 342 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Pdx1P52946 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pdx1P52946 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 Gm5982-201ENSMUST00000196234 512 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Gm5714-201ENSMUST00000197343 566 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.58□□□□□ -0.56
Pdx1P52946 Gm4482-201ENSMUST00000200876 742 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Gm45113-201ENSMUST00000207518 165 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.58□□□□□ -0.56
Pdx1P52946 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.58□□□□□ -0.56
Pdx1P52946 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms