Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
GdnfP48540 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.34□□□□□ -0.75
GdnfP48540 Gm27516-201ENSMUST00000184237 98 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Gm29396-201ENSMUST00000185659 716 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Gm28975-201ENSMUST00000186412 686 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.34□□□□□ -0.75
GdnfP48540 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.34□□□□□ -0.75
GdnfP48540 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Gm6013-201ENSMUST00000212264 699 ntBASIC10.34□□□□□ -0.75
GdnfP48540 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.34□□□□□ -0.75
GdnfP48540 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Gm7399-201ENSMUST00000032395 858 ntBASIC10.34□□□□□ -0.75
GdnfP48540 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
GdnfP48540 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
GdnfP48540 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
GdnfP48540 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
GdnfP48540 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
GdnfP48540 Gm15370-201ENSMUST00000117158 253 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm14776-201ENSMUST00000121029 887 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.33□□□□□ -0.76
GdnfP48540 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
GdnfP48540 Gm22993-201ENSMUST00000175423 254 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
GdnfP48540 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm2546-201ENSMUST00000182630 991 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Mir8109-201ENSMUST00000184375 117 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm42627-201ENSMUST00000197347 224 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.33□□□□□ -0.76
GdnfP48540 Gm17917-201ENSMUST00000218561 953 ntBASIC10.33□□□□□ -0.76
GdnfP48540 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.33□□□□□ -0.76
GdnfP48540 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.33□□□□□ -0.76
GdnfP48540 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms