Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.32□□□□□ -0.44
Rfx2P48379 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rfx2P48379 Gm13809-201ENSMUST00000117921 597 ntBASIC12.32□□□□□ -0.44
Rfx2P48379 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Gm12164-201ENSMUST00000121695 551 ntBASIC12.32□□□□□ -0.44
Rfx2P48379 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Gm10774-201ENSMUST00000188689 204 ntBASIC12.32□□□□□ -0.44
Rfx2P48379 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.32□□□□□ -0.44
Rfx2P48379 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rfx2P48379 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfx2P48379 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx2P48379 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx2P48379 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rfx2P48379 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfx2P48379 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.31□□□□□ -0.44
Rfx2P48379 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gm5419-201ENSMUST00000119301 527 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Gm15610-201ENSMUST00000120584 195 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Gm13461-201ENSMUST00000120980 662 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.31□□□□□ -0.44
Rfx2P48379 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx2P48379 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gm45770-201ENSMUST00000212105 616 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Gm2553-201ENSMUST00000215986 605 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rfx2P48379 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.31□□□□□ -0.44
Rfx2P48379 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rfx2P48379 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rfx2P48379 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfx2P48379 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfx2P48379 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfx2P48379 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rfx2P48379 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Rfx2P48379 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfx2P48379 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.3□□□□□ -0.44
Rfx2P48379 Gm8199-201ENSMUST00000121323 823 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms