Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Rprl1-201ENSMUST00000158050 327 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm27514-201ENSMUST00000183692 110 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm9996-201ENSMUST00000070359 913 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.68□□□□□ -0.86
Hist1h1aP43275 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hist1h1aP43275 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm11425-201ENSMUST00000119608 498 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm43133-201ENSMUST00000197472 463 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm17931-201ENSMUST00000208132 634 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm9396-201ENSMUST00000076703 567 ntBASIC9.67□□□□□ -0.86
Hist1h1aP43275 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hist1h1aP43275 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms